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Anammox and denitrification in the oxygen minimum zone of the eastern South Pacific

Abstract.

"We quantified the removal of fixed nitrogen as N2 production by anammox and N2 and N2O production by denitrification over a distance of 1900 km along the coasts of Chile and Peru, using short‐term incubations with 15N‐labeled substrates. The eastern South Pacific contains an oxygen minimum zone (OMZ) characterized by an anoxic, nitrate‐ and nitrite‐rich layer of ∼ 200‐m thickness below 30–90 m of oxic water. [...]"

Source: Limnology and Oceanography
Authors: Tage Dalsgaard et al.
DOI: 10.4319/lo.2012.57.5.1331

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Autonomous profiling float observations reveal the dynamics of deep biomass distributions in the denitrifying oxygen minimum zone of the Arabian Sea

Abstract.

"Data from 13 autonomous profiling BGC-Argo floats, equipped with biogeochemical and bio-optical sensors deployed between 2011 and 2016, were used to explore the potential of bio-optical methods to map deep biomass distribution in the Arabian Sea oxygen minimum zone (OMZ). Dissolved oxygen sensors revealed concentrations below 5 μmol kg−1 for much of the depth range between 200 and 400 m and below 1 μmol kg−1 in the centre of the OMZ, which is well below climatological values. [...]"

Source: Journal of Marine Systems
Authors: Bożena Wojtasiewicz et al.
DOI: 10.1016/j.jmarsys.2018.07.002

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Fixed nitrogen loss from the eastern tropical North Pacific and Arabian Sea oxygen deficient zones determined from measurements of N2:Ar

Abstract.

"Previous work estimating the N2excess above background due to denitrification has suggested that nitrate deficit-type methods may be an underestimate of fixed nitrogen (N) loss in the major oxygen deficient zones of the ocean. The N2excess approach has the advantage over nitrate deficit-type methods in that it does not depend on stoichiometric assumptions of fixed N to phosphate or oxygen utilization and avoids any uncertainly regarding the pathway of N loss. [...]"

Source: Global Geochemical Cycles (2012)
Authors: Bonnie X. Chang, Allan H. Devol and Steven R. Emerson
DOI: 10.1029/2011GB004207

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Vertical partitioning of nitrogen-loss processes across the oxic-anoxic interface of an oceanic oxygen minimum zone

Abstract.

"We investigated anammox, denitrification and dissimilatory reduction of nitrite to ammonium (DNRA) activity in the Eastern Tropical South Pacific oxygen minimum zone (OMZ) off northern Chile, at high‐depth resolution through the oxycline into the anoxic OMZ core. This was accompanied by high‐resolution nutrient and oxygen profiles to link changes in nitrogen transformation rates to physicochemical characteristics of the water column. Denitrification was detected at most depths, but anammox was the most active N2‐producing process, while DNRA was not detectable. [...]"

Source: Environmental Microbiology
Authors: Loreto De Brabandere et al.
DOI: 10.1111/1462-2920.12255

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The impact of primary and export production on the formation of the secondary nitrite maximum: A model study

Abstract.

"The so-called secondary nitrite maximum (SNM) is a pronounced subsurface feature in many oxygen deficient zones of the ocean. A nitrite layer of up to several hundred meters thickness indicates high microbial activity and nitrogen loss from the system. To study the effects of primary and export production on the SNM, we have developed a one-dimensional ecosystem model for oxygen deficient zones. Our model couples the marine nitrogen and oxygen cycles with physical water column processes, includes euphotic, aphotic, aerobic and anaerobic processes and thereby dynamically describes source and sink processes for nitrite. [...]"

Source: Ecological Modelling
Authors: Aike Beckmann and Inga Hense
DOI: 10.1016/j.ecolmodel.2017.05.014

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Planktonic food web structure and trophic transfer efficiency along a productivity gradient in the tropical and subtropical Atlantic Ocean

Abstract.

"Oligotrophic and productive areas of the ocean differ in plankton community composition and biomass transfer efficiency. Here, we describe the plankton community along a latitudinal transect in the tropical and subtropical Atlantic Ocean. Prochlorococcus dominated the autotrophic community at the surface and mixed layer of oligotrophic stations, replaced by phototrophic picoeukaryotes and Synechococcus in productive waters. [...]"

Source: Scientific Reportsvolume
Authors: Laia Armengol et al.
DOI: 10.1038/s41598-019-38507-9

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Metabolic preference of nitrate over oxygen as an electron acceptor in foraminifera from the Peruvian oxygen minimum zone

Abstract.

"Benthic foraminifera populate a diverse range of marine habitats. Their ability to use alternative electron acceptors—nitrate (NO3−) or oxygen (O2)—makes them important mediators of benthic nitrogen cycling. Nevertheless, the metabolic scaling of the two alternative respiration pathways and the environmental determinants of foraminiferal denitrification rates are yet unknown. We measured denitrification and O2 respiration rates for 10 benthic foraminifer species sampled in the Peruvian oxygen minimum zone (OMZ). [...]"

Source: PNAS
Authors: Nicolaas Glock et al.
DOI: 10.1073/pnas.1813887116

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Biomarker evidence for the occurrence of anaerobic ammonium oxidation in the eastern Mediterranean Sea during Quaternary and Pliocene sapropel formati

Abstract.

"The eastern Mediterranean Sea sedimentary record is characterised by intervals of organic rich sediment (sapropels), indicating periods of severe anoxia triggered by astronomical forcing. It has been hypothesized that nitrogen fixation was crucial in injecting the Mediterranean Sea with bioavailable nitrogen (N) during sapropel events. However, the evolution of the N biogeochemical cycle of sapropels is poorly understood. For example, the role of the complementary removal reaction, anaerobic ammonium oxidation (anammox), has not been investigated because the traditional lipid biomarkers for anammox, ladderane fatty acids, are not stable over long periods in the sedimentary record. [...]

Source: Biogeosciences
Authors: Darci Rush et al.
DOI: 10.5194/bg-2019-27

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Variability of seawater chemistry in a kelp forest environment is linked to in situ transgenerational effects in the purple sea urchin

Abstract.

"While the value of giant kelp (Macrocystis pyrifera) as a habitat-forming foundation species is well-understood, it is unclear how they impact the oxygen concentration and pH of the surrounding seawater, and further, how such a dynamic abiotic environment will affect eco-evolutionary dynamics in a context of global change. Here, we profiled the nearshore kelp forest environment in Southern California to understand changes in dissolved oxygen (DO) and pH with high spatiotemporal resolution. We then examined transgenerational effects using sea urchins (Strongylocentrotus purpuratus) as our study organism.  [...]"

Source: Frontiers in Marine Science
Authors: Umihiko Hoshijima and Gretchen Hofmann1
DOI: 10.3389/fmars.2019.00062

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Ocean colour signature of climate chang

Abstract.

"Marine calcifiers are considered to be among the most vulnerable taxa to climate-forced environmental changes occurring on continental margins with effects hypothesized to occur on microstructural, biomechanical, and geochemical properties of carbonate structures. Natural gradients in temperature, salinity, oxygen, and pH on an upwelling margin combined with the broad depth distribution (100–1,100 m) of the pink fragile sea urchin, Strongylocentrotus (formerly Allocentrotus) fragilis, along the southern California shelf and slope provide an ideal system to evaluate potential effects of multiple climate variables on carbonate structures in situ. [...]"

Source: Nature Communications
Authors: Stephanie Dutkiewicz et al.
DOI: 10.1038/s41467-019-08457-x

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